Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903426.1_cds_XP_016453470.1_47593
CDS Infomation

[gene=LOC107777833] [db_xref=GeneID:107777833] [protein=protein NRT1/ PTR FAMILY 5.8-like] [protein_id=XP_016453470.1] [location=join(53137..53191,53465..53682,55046..55569,55835..56654)] [gbkey=CDS]
Sequence

ATGGCTGGCGGACAAAGTCGAACAAGTCTCAACAAACCATGTATTCTCCTCATAGTGATA
GCGGGAATGGAGAGGTTTGCATTCAAAGGGGTGGCGTCAAACTTAGTGACATATCTAACA
GATGTGGCCAAAATGAGCAATTCAGCGGCGGCAAAGAAGGTTAACAATTGGTGTGGTATT
ACGTCTATGCTCCCACTCCTTGTTGCTCCATTAGCTGATTCTTATTTGGACCGTTACACC
ACTGTACTGGCTTCTTCCTCTCTTTATGTTGCGGGTCTTTTAGCTTTGACATCATTGGCA
TTACAATGGCCATGGACTAATTCCGCTGACAAATCTGGCTTCACTTCATCCTTTTCTTGG
TCTCTGAATTTAATTTCACTCGGCCAAGCCGGCTACAACCCCTCTTTGCAAGCTTTTGGA
GCAGACCAATTTGACGATGATGAAGAATTGCCGAGTAGTAAAAATGATCAAAGCTCCAAG
AAGAAAAGTTCCTTCTTCCAATGGTGGTATTTTGGTATATGTTGTGGAAGCTTGCTAGGA
GTGTCTATTATGTCATATATACAGGACACATTAGGATGGGGCTTAGGTTTCGCCATTCCT
TCAATTGCTATGGCTATATCAGTTATAGTCTTCAGATTTGGGAACCGATTTTATACACAC
AAGGATGGAGAAATTATTCATATTAAGTCATTGGGAGATCATATAGTTAAAGCTATTAAA
GCAGCTACCTCAAGATTGACCTGTGGTGAGATTGCTGTTCCAACATATACTAACAAGTCA
AATGTCAGTGAGATCGAACTTGAAGATAGACCACTCTGCCAACAAGATTCAGGGAGCAAA
GATGGCGCAGACAAAAAATCGGAGAATGGGATCAATTTTGTTAAAATTCTAAAAGTAGTA
CTGCCTCTACTACCAGTGTGGACTCTGCTTCTGATGTTTGCAGTAATTTTTCAACAGCCT
GCAACGTTCTTTACTAAGCAAGGTGTGACAATGAAGAGAAACATAGGAAACAATTTCCGA
ATTCCACCAGCTGCGCTTCAGAGTTCAATTACCATATCTATAATTCTGCTCATGCCACTG
TACGACACGTTCTTCATCCCCTTCGTTCGCGTTTTCACAAGTAACGAGAAGGGTATCACT
GTGATGCAGAGAATGGGAATAGGTATGTTCCTTTCAGTAATAGCAATGATAATTGCAGCT
GTTACTGAAAGAAAAAGACTCGAGATCAGCAGAAATTTGGTAACTTCTTCAGAAACTGTG
CCAATGAGCATATTTTGGTTGCTCCCTCAATACATTCTCCTGGGAATTTCAGATATATTC
ACAGTTGTTGGAATGCAAGAGTTCTTTTATTCTGAAGTTCCTATAAATATGAGAACATTA
GGCATTGCCCTTTATACTAGTGTTTTTGGGTGTGGTAGTTTCTTCAGCTCATTCCTTATA
TCCGTGATCGAAAAATTGACAAGTACAAGAGGAGCAAAGCAGAATTGGTTCGCTGATGAC
ATGAGAAAAGCCCGTTTCGACAACTATTATTGGTTTCTGGCTTTGTCAAGTGCAGCAAGT
TTTCTATTATTCATGGTTTTCTGTCGATTTTACAGAAGCAGGACTATAGTTGATTAG

Peptide Sequence

PEP ID

XP_016453470.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.8-like [Nicotiana tabacum]
Sequence

MAGGQSRTSLNKPCILLIVIAGMERFAFKGVASNLVTYLTDVAKMSNSAAAKKVNNWCGI
TSMLPLLVAPLADSYLDRYTTVLASSSLYVAGLLALTSLALQWPWTNSADKSGFTSSFSW
SLNLISLGQAGYNPSLQAFGADQFDDDEELPSSKNDQSSKKKSSFFQWWYFGICCGSLLG
VSIMSYIQDTLGWGLGFAIPSIAMAISVIVFRFGNRFYTHKDGEIIHIKSLGDHIVKAIK
AATSRLTCGEIAVPTYTNKSNVSEIELEDRPLCQQDSGSKDGADKKSENGINFVKILKVV
LPLLPVWTLLLMFAVIFQQPATFFTKQGVTMKRNIGNNFRIPPAALQSSITISIILLMPL
YDTFFIPFVRVFTSNEKGITVMQRMGIGMFLSVIAMIIAAVTERKRLEISRNLVTSSETV
PMSIFWLLPQYILLGISDIFTVVGMQEFFYSEVPINMRTLGIALYTSVFGCGSFFSSFLI
SVIEKLTSTRGAKQNWFADDMRKARFDNYYWFLALSSAASFLLFMVFCRFYRSRTIVD

Transcript Sequence

Gene sequence data has not been registered.